Description Usage Arguments Value
View source: R/Download_Preprocess.R
Internal. Pre-process gene expression data for cancer samples.
1 2 | Preprocess_MAdata_Cancer(CancerSite, Directory, File,
MissingValueThresholdGene = 0.3, MissingValueThresholdSample = 0.1)
|
CancerSite |
TCGA code for the cancer site. |
Directory |
Directory. |
File |
File. |
MissingValueThresholdGene |
threshold for missing values per gene. Genes with a percentage of NAs greater than this threshold are removed. Default is 0.3. |
MissingValueThresholdSample |
threshold for missing values per sample. Samples with a percentage of NAs greater than this threshold are removed. Default is 0.1. |
The data matrix.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.