TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust: The...
In MethylMix: MethylMix: Identifying methylation driven cancer genes
Description
Usage
Arguments
Value
View source: R/Download_Preprocess.R
Description
Internal. Cluster probes into genes.
Usage
1
2
TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust(Gene,
ProbeAnnotation, MET_Cancer, MET_Normal = NULL, CorThreshold = 0.4)
Arguments
Gene
gene.
ProbeAnnotation
data set matching probes to genes.
MET_Cancer
data matrix for cancer samples.
MET_Normal
data matrix for normal samples.
CorThreshold
correlation threshold for cutting the clusters.
Value
List with the clustered data sets and the mapping between probes and genes.
MethylMix documentation built on Nov. 8, 2020, 11:08 p.m.
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Description Usage Arguments Value
View source: R/Download_Preprocess.R
Description
Internal. Cluster probes into genes.
Usage
1 2 | TCGA_GENERIC_MET_ClusterProbes_Helper_ClusterGenes_with_hclust(Gene,
ProbeAnnotation, MET_Cancer, MET_Normal = NULL, CorThreshold = 0.4)
|
Arguments
Gene |
gene. |
ProbeAnnotation |
data set matching probes to genes. |
MET_Cancer |
data matrix for cancer samples. |
MET_Normal |
data matrix for normal samples. |
CorThreshold |
correlation threshold for cutting the clusters. |
Value
List with the clustered data sets and the mapping between probes and genes.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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