TCGA_Process_EstimateMissingValues: The TCGA_Process_EstimateMissingValues function

Description Usage Arguments Value

View source: R/Download_Preprocess.R

Description

Internal. Removes patients and genes with more missing values than the MissingValueThreshold, and imputes remaining missing values using Tibshirani's KNN method.

Usage

1
TCGA_Process_EstimateMissingValues(MET_Data, MissingValueThreshold = 0.2)

Arguments

MET_Data

data matrix.

MissingValueThreshold

threshold for removing samples and genes with too many missing values.

Value

the data set with imputed values and possibly some genes or samples deleted.


MethylMix documentation built on May 6, 2019, 2:08 a.m.