outputAnnotatedDataMatrix: Outputs a tab delimited file from an ExpressionSet

In MiChip: MiChip Parsing and Summarizing Functions

Description

Takes an ExpressionSet and outputs a tab delimited file containing feature annotation to the left and hyb specific expression/flag data to the right

Usage

outputAnnotatedDataMatrix(eset, exptname, stage, dataElement)

Arguments

eset	ExpressionSet containing the matrix and annotation to output
exptname	a string containing the name of the experiment. Used to build file name
stage	a string containing the stage of the data in the matrix e.g. normalized
dataElement	a string containing the name of the data element in the ExpressionSet to be output

Examples

#Write out an annotated tab delimited file for the normalized data
## Not run: 
outputAnnotatedDataMatrix(normedEset, "MyMicroArrayExpt","Median_Normalized", "exprs")
## End(Not run)

MiChip documentation built on Nov. 8, 2020, 8:01 p.m.