plotIntensitiesScatter: Plot pairwise intensity scatter

In MiChip: MiChip Parsing and Summarizing Functions

Description

Creates a pairwise set of scatter plots from a data matrix and writes it out to file

Usage

plotIntensitiesScatter(dmat, controls=NULL, exptname, maintitle)

Arguments

dmat	matrix containing data from an experiment to be plotted
controls	matrix of row numbers containing control data to be plotted in a different colour
exptname	Name of the experiment, used for build the filename
maintitle	String used to build the maintitle of the graph

Examples

#Plot the pairwise intensities from myexpt
## Not run: 
plotIntensitiesScatter(dmat, NULL, "MyExpt", "Median_Normalized")

## End(Not run)

MiChip documentation built on Nov. 8, 2020, 8:01 p.m.