Pedigree-class: Deprecated class for storing pedigree data

Description Usage Arguments Slots

Description

Deprecated class for storing pedigree data

Usage

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## S4 method for signature 'Pedigree'
trios(object)

## S4 method for signature 'Pedigree'
offspringNames(object)

## S4 method for signature 'Pedigree'
show(object)

## S4 method for signature 'Pedigree,ANY,ANY,ANY'
x[i, j, ..., drop = FALSE]

## S4 method for signature 'Pedigree'
dim(x)

Arguments

object

a Pedigree object

x

a Pedigree object

i

a numeric vector for subsetting (optional)

j

ignored

...

ignored

drop

ignored

Slots

trios

a data.frame with colnames 'F', 'M', and 'O' containing sample identifiers for the father (F), mother (M), and offspring (O).

trioIndex

a data.frame


MinimumDistance documentation built on Nov. 8, 2020, 11:11 p.m.