MulCom False Significant Genes

Description

Calculate the False Significant Genes for m and t defined by the user

Usage

1
mulFSG(Mulcom_P, m, t)

Arguments

Mulcom_P

an object of class MULCOM

m

m: a numeric value corresponding to log 2 ratio correction for MulCom Test

t

t: a numeric value corresponding to t values for MulCom Test

Details

mulFDR evaluate the False Significant genes on the Mulcom_P object according to specific m and t parameters. For each permutation it is calculated the number of positive genes. An estimation of the false called genes is evaluated with the median for each experimental subgroups

Author(s)

Claudio Isella, claudio.isella@ircc.it

Examples

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data(benchVign)
mulcom_perm <- mulPerm(Affy, Affy$Groups, 10, 7)
mulcom_fsg <- mulFSG(mulcom_perm, 0.2, 2)