mulFSG: MulCom False Significant Genes

Description Usage Arguments Details Author(s) Examples

View source: R/mulFSG.R

Description

Calculate the False Significant Genes for m and t defined by the user

Usage

1
mulFSG(Mulcom_P, m, t)

Arguments

Mulcom_P

an object of class MULCOM

m

m: a numeric value corresponding to log 2 ratio correction for MulCom Test

t

t: a numeric value corresponding to t values for MulCom Test

Details

mulFDR evaluate the False Significant genes on the Mulcom_P object according to specific m and t parameters. For each permutation it is calculated the number of positive genes. An estimation of the false called genes is evaluated with the median for each experimental subgroups

Author(s)

Claudio Isella, [email protected]

Examples

1
2
3
data(benchVign)
mulcom_perm <- mulPerm(Affy, Affy$Groups, 10, 7)
mulcom_fsg <- mulFSG(mulcom_perm, 0.2, 2)

Mulcom documentation built on Nov. 17, 2017, 9:09 a.m.