MulCom optimization

Description

The function systematically performs the calculation of significant genes and corresponding FDR for all the combination of given list of m and t values.

Usage

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mulOpt(Mulcom_P, vm, vt) 

Arguments

Mulcom_P

an object of class Mulcom_P

vm

a vector of m values to test

vt

a vector of t values to test

Details

mulOpt The function systematically performs the calculation of significant genes and corresponding FDR for all the combination of given list of m and t values.

Author(s)

Claudio Isella, claudio.isella@ircc.it

Examples

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data(benchVign)
mulcom_perm <- mulPerm(Affy, Affy$Groups, 10, 7)
mulcom_opt <- mulOpt(mulcom_perm, seq(0.1, 0.5, 0.1), seq(1, 3, 0.1))