selectFirstNeighborsOfSelectedNodes: selectFirstNeighborsOfSelectedNodes
In RCytoscape: Display and manipulate graphs in Cytoscape

Description Usage Arguments Value Author(s) See Also Examples

Expand the selection by adding the first neighbors, in the Cytosape network, of the nodes currently selected (again, in the Cytoscape network). The R graph is unchanged

1	selectFirstNeighborsOfSelectedNodes (obj)

obj

a CytoscapeWindowClass object.

None.

Paul Shannon

clearSelection getSelectedNodeCount getSelectedNodes hideSelectedNodes getFirstNeighbors

  cw <- new.CytoscapeWindow ('selectFirstNeighborsOfSelecteNodes.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw)
  clearSelection (cw)
  selectNodes (cw, 'A')
  selectFirstNeighborsOfSelectedNodes (cw)
  print (sort (getSelectedNodes (cw)))
    # [1] "A" "B" "C"