setDefaultEdgeColor: setDefaultEdgeColor

In RCytoscape: Display and manipulate graphs in Cytoscape

Description

In the specified CytoscapeConnection, stipulate the color for all edges other than those mentioned in a edge color rule.

Usage

setDefaultEdgeColor(obj, new.color, vizmap.style.name = "default")

Arguments

obj	a CytoscapeConnectionClass object.
new.color	a String object, a hex string, of the form '#RRGGBB'.
vizmap.style.name	a String object, if this vizmap style needs to be distinguished from the default type.

Value

None.

Author(s)

Paul Shannon

See Also

setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setDefaultEdgeFontSize setEdgeColorRule

Examples

  cw <- new.CytoscapeWindow ('setDefaultEdgeColor test', graph=makeSimpleGraph())
  displayGraph (cw)
  redraw (cw)
  layoutNetwork(cw, 'jgraph-spring')
  setDefaultEdgeColor (cw, '#FFFFFF') # white edges
  redraw (cw)

RCytoscape documentation built on Nov. 17, 2017, 10:52 a.m.