setDefaultNodeColor: setDefaultNodeColor

In RCytoscape: Display and manipulate graphs in Cytoscape

Description

In the specified CytoscapeWindow, stipulate the color for all nodes other than those mentioned in a node border color rule.

Usage

setDefaultNodeColor(obj, new.color, vizmap.style.name = "default")

Arguments

obj	a CytoscapeConnectionClass object.
new.color	a String object, a hex string, of the form '#RRGGBB'.
vizmap.style.name	a String object.

Value

None.

Author(s)

Paul Shannon

See Also

setDefaultNodeShape setDefaultNodeColor setDefaultNodeSize setDefaultNodeColor setDefaultNodeBorderColor setDefaultNodeBorderWidth setDefaultNodeFontSize setDefaultNodeLabelColor setDefaultEdgeLineWidth setEdgeColorRule setNodeBorderColorRule

Examples

  cw <- new.CytoscapeWindow ('setDefaultNodeColor.test', graph=makeSimpleGraph())
  displayGraph (cw)
  redraw (cw)
  layoutNetwork(cw, 'jgraph-spring')
  setDefaultNodeColor (cw, '#8888FF') # light blue
  redraw (cw)

RCytoscape documentation built on Nov. 17, 2017, 10:52 a.m.