setEdgeLineStyleDirect: setEdgeLineStyleDirect

In RCytoscape: Display and manipulate graphs in Cytoscape

Description

In the specified CytoscapeWindow, set the lineStyle of the specified edge or edges, bypassing all rule mapping. The getLineStyles method shows the possible values.

Usage

setEdgeLineStyleDirect(obj, edge.names, new.values)

Arguments

obj	a CytoscapeWindowClass object.
edge.names	one or more String objects, cy2-style edge names.
new.values	one or more String object, from the supported set.

Value

None.

Author(s)

Paul Shannon

See Also

setEdgeLineStyleRule setEdgeColorDirect setEdgeFontSizeDirect setEdgeLabelColorDirect setEdgeLabelDirect setEdgeLabelOpacityDirect setEdgeLabelWidthDirect setEdgeLineStyleDirect setEdgeLineWidthDirect setEdgeOpacityDirect setEdgeSourceArrowColorDirect setEdgeSourceArrowDirect setEdgeSourceArrowOpacityDirect setEdgeSourceArrowShapeDirect setEdgeTargetArrowColorDirect setEdgeTargetArrowDirect setEdgeTargetArrowOpacityDirect setEdgeTargetArrowShapeDirect setEdgeTooltipDirect

Examples

  cw <- new.CytoscapeWindow ('setEdgeLineStyleDirect.test', graph=makeSimpleGraph())
  displayGraph (cw)
  redraw (cw)
  layoutNetwork(cw, 'jgraph-spring')
  edges.of.interest <- as.character (cy2.edge.names (cw@graph))
  supported.styles <- getLineStyles (cw)

    # pass three edges and three styles
  setEdgeLineStyleDirect (cw, edges.of.interest, supported.styles [5:7])
  redraw (cw)

    # pass three edges and one style
  setEdgeLineStyleDirect (cw, edges.of.interest, supported.styles [8])
  redraw (cw)

    # now loop through all of the styles

  for (style in supported.styles) {
    setEdgeLineStyleDirect (cw, edges.of.interest, style)
    redraw (cw)
    }


     # restore the default
  setEdgeLineStyleDirect (cw, edges.of.interest, 'SOLID')
  redraw (cw)

RCytoscape documentation built on Nov. 17, 2017, 10:52 a.m.