setLayoutProperties: setLayoutProperties

In RCytoscape: Display and manipulate graphs in Cytoscape

Description

Sets the specified properties for the specified layout. Unmentioned properties are left unchanged.

Usage

setLayoutProperties(obj, layout.name, properties.list)

Arguments

obj	a CytoscapeConnectionClass object.
layout.name	a string object.
properties.list	a a named list with as many entries as you wish to modify

Value

None.

Author(s)

Paul Shannon

See Also

layout getLayoutNames getLayoutNameMapping getLayoutPropertyNames getLayoutPropertyType getLayoutPropertyValue

Examples

  cy <- CytoscapeConnection ()
  prop.names <- getLayoutPropertyNames (cy, 'isom')
  print (prop.names)
    #  "maxEpoch" "sizeFactor" "radiusConstantTime"   "radius"  "minRadius" "initialAdaptation"  "minAdaptation" "coolingFactor" 
  print (getLayoutPropertyValue (cy, 'isom', 'radiusConstantTime'))
    # modify just two of the eight properties; the others are unchanged
  setLayoutProperties (cy, 'isom', list (radiusConstantTime=4, radius=20))

RCytoscape documentation built on Nov. 17, 2017, 10:52 a.m.