setNodeBorderWidthRule: setNodeBorderWidthRule
In RCytoscape: Display and manipulate graphs in Cytoscape

Description Usage Arguments Value Author(s) Examples

Specify the node attribute which controls the thickness of the nodes displayed in the graph. This is currently only a lookup mapping. An interpolated mapping will be added in the future.

1	setNodeBorderWidthRule(obj, node.attribute.name, attribute.values, line.widths, default.width)

`obj`	a `CytoscapeWindowClass` object.
`node.attribute.name`	the node attribute whose values will, when this rule is applied, determine the nodeBorderWidth on each node.
`attribute.values`	observed values of the specified attribute on the nodes.
`line.widths`	the corresponding widths.
`default.width`	use this where the rule fails to apply

None.

Paul Shannon

  cw <- new.CytoscapeWindow ('setNodeBorderWidthRule.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'jgraph-spring')
  redraw (cw)
  node.attribute.values = c ('kinase', 'transcription factor', 'glycoprotein')
  line.widths = c (0, 8, 16)
  setNodeBorderWidthRule (cw, 'type', node.attribute.values, line.widths)