get.covg.thres-RnBDiffMeth-methods: get.covg.thres-methods

Description Usage Arguments Value Author(s) Examples

Description

Gets the coverage threshold employed for obtaining statistics in the differential methylation tables

Usage

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## S4 method for signature 'RnBDiffMeth'
get.covg.thres(object)

Arguments

object

RnBDiffMeth object

Value

integer coverage threshold

Author(s)

Fabian Mueller

Examples

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library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
dm <- rnb.execute.computeDiffMeth(rnb.set.example,pheno.cols=c("Sample_Group","Treatment"))
get.covg.thres(dm)

RnBeads documentation built on March 3, 2021, 2 a.m.