rnb.bed.from.segmentation: rnb.bed.from.segmentation

In RnBeads: RnBeads

Description

This function creates a BED file from the segmentation result of rnb.execute.segmentation and stores it on disk.

Usage

rnb.bed.from.segmentation(
  rnb.set,
  sample.name,
  type = "final",
  store.path = getwd()
)

Arguments

rnb.set	An RnBSet-class object obtained by executing rnb.execute.segmentation.
sample.name	The sample name for which segmentation was computed.
type	The type of segmentation (PMDs, UMRs, LMRs, HMDs or final).
store.path	Path to which the BED file is to be stored.

Author(s)

Michael Scherer

RnBeads documentation built on March 3, 2021, 2 a.m.