Calculates a table summarizing the effect of the applied filtering procedures.
Methylation dataset before filtering as an object of type inheriting
Methylation dataset after filtering as an object of type inheriting
This function expects that the sites and samples in
new.set are subsets of the sites and samples in
old.set, respectively. If this is not the case, it exists with an error.
matrix summarizing the number of removed and retained sites, samples, and (optionally) reliable and
rnb.run.preprocessing for running the whole preprocessing module