rnb.execute.gender.prediction

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Description

Infers the gender of every sample in the given Infinium 450k dataset, based on average signal intensity values on the autosomes and the sex chromosomes.

Usage

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rnb.execute.gender.prediction(rnb.set)

Arguments

rnb.set

Methylation dataset as an object of type RnBeadRawSet.

Value

The possibly modified dataset. If gender could be predicted, the sample annotation table is enriched with two more columns - "Predicted Male Probability" and "Predicted Gender".

Author(s)

Yassen Assenov

Examples

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library(RnBeads.hg19)
data(small.example.object)
rnb.set.example <- rnb.execute.gender.prediction(rnb.set.example)
table(rnb.set.example[, "Predicted Gender"])

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