rnb.execute.gender.prediction: rnb.execute.gender.prediction

Description Usage Arguments Value Author(s) Examples

View source: R/gender.R

Description

Infers the gender of every sample in the given Infinium 450k dataset, based on average signal intensity values on the autosomes and the sex chromosomes.

Usage

1

Arguments

rnb.set

Methylation dataset as an object of type RnBeadRawSet.

Value

The possibly modified dataset. If gender could be predicted, the sample annotation table is enriched with two more columns - "Predicted Male Probability" and "Predicted Gender".

Author(s)

Yassen Assenov

Examples

1
2
3
4
library(RnBeads.hg19)
data(small.example.object)
rnb.set.example <- rnb.execute.gender.prediction(rnb.set.example)
table(rnb.set.example[, "Predicted Gender"])


RnBeads documentation built on May 20, 2017, 9:43 p.m.
Search within the RnBeads package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.