rnb.execute.high.coverage.removal: rnb.execute.high.coverage.removal
In RnBeads: RnBeads
Description
Usage
Arguments
Value
Author(s)
Description
Removes methylation sites with a coverage larger than 100 times the 95-percentile of coverage in each sample.
Usage
1
rnb.execute.high.coverage.removal(rnb.set)
Arguments
rnb.set
Methylation dataset as an object of type inheriting RnBiseqSet.
Value
list of two elements:
"dataset"The (possibly) modified dataset after retaining sites on autosomes only.
"filtered"integer vector storing the indices of all removed sites.
Author(s)
Fabian Mueller
RnBeads documentation built on March 3, 2021, 2 a.m.
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Description Usage Arguments Value Author(s)
Description
Removes methylation sites with a coverage larger than 100 times the 95-percentile of coverage in each sample.
Usage
1 | rnb.execute.high.coverage.removal(rnb.set)
|
Arguments
rnb.set |
Methylation dataset as an object of type inheriting |
Value
list of two elements:
"dataset"The (possibly) modified dataset after retaining sites on autosomes only.
"filtered"integervector storing the indices of all removed sites.
Author(s)
Fabian Mueller
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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