rnb.export.to.ewasher: rnb.export.to.ewasher
In RnBeads: RnBeads
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Data exported to a format compatible with the FaST-LMM-EWASher tool for cell-mixture adjustment.
see Zou, J., et al., Nature Methods, 2014
for further details on the tool.
Usage
1
rnb.export.to.ewasher(rnb.set, out.dir, reg.type = "sites", ...)
Arguments
rnb.set
Object of class RnBSet
out.dir
output directory. If not existing, it will be created and all exported files will be placed here.
If existing, this functions results in an error.
reg.type
region type to be exported
...
passed on to get.comparison.info
Value
a list containing information on the export
Author(s)
Fabian Mueller
Examples
1
2
3
4
library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
rnb.export.to.ewasher(rnb.set.example,tempfile(pattern="forEwasher"))
RnBeads documentation built on March 3, 2021, 2 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Data exported to a format compatible with the FaST-LMM-EWASher tool for cell-mixture adjustment. see Zou, J., et al., Nature Methods, 2014 for further details on the tool.
Usage
1 | rnb.export.to.ewasher(rnb.set, out.dir, reg.type = "sites", ...)
|
Arguments
rnb.set |
Object of class |
out.dir |
output directory. If not existing, it will be created and all exported files will be placed here. If existing, this functions results in an error. |
reg.type |
region type to be exported |
... |
passed on to |
Value
a list containing information on the export
Author(s)
Fabian Mueller
Examples
1 2 3 4 | library(RnBeads.hg19)
data(small.example.object)
logger.start(fname=NA)
rnb.export.to.ewasher(rnb.set.example,tempfile(pattern="forEwasher"))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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