rnb.get.chromosomes: rnb.get.chromosomes

Description Usage Arguments Value Author(s) Examples

View source: R/annotations.R

Description

Gets the chromosome names supported for the specified assembly.

Usage

1

Arguments

assembly

Genome assembly of interest. See rnb.get.assemblies for the list of supported genomes.

Value

character vector of supported chromosomes for the specified genome assembly. The elements of the vector follow the Ensembl convention ("1", "2", ...), and the names of this vector - the convention of the UCSC Genome Browser ("chr1", "chr2", ...).

Author(s)

Pavlo Lutsik

Examples

1
"chrX" %in% names(rnb.get.chromosomes())

RnBeads documentation built on May 31, 2017, 11:35 a.m.