rnb.get.chromosomes: rnb.get.chromosomes
In RnBeads: RnBeads
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Gets the chromosome names supported for the specified assembly.
Usage
1
rnb.get.chromosomes(assembly = "hg19")
Arguments
assembly
Genome assembly of interest. See rnb.get.assemblies for the list of supported genomes.
Value
character vector of supported chromosomes for the specified genome assembly. The elements of the
vector follow the Ensembl convention ("1", "2", ...), and the
names of this vector - the convention of the UCSC Genome Browser
("chr1", "chr2", ...).
Author(s)
Pavlo Lutsik
Examples
1
"chrX" %in% names(rnb.get.chromosomes())
RnBeads documentation built on March 3, 2021, 2 a.m.
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Description Usage Arguments Value Author(s) Examples
Description
Gets the chromosome names supported for the specified assembly.
Usage
1 | rnb.get.chromosomes(assembly = "hg19")
|
Arguments
assembly |
Genome assembly of interest. See |
Value
character vector of supported chromosomes for the specified genome assembly. The elements of the
vector follow the Ensembl convention ("1", "2", ...), and the
names of this vector - the convention of the UCSC Genome Browser
("chr1", "chr2", ...).
Author(s)
Pavlo Lutsik
Examples
1 | "chrX" %in% names(rnb.get.chromosomes())
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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