rnb.initialize.reports: rnb.initialize.reports
In RnBeads: RnBeads

Description Usage Arguments Value Author(s) See Also Examples

Creates a new directory to host HTML reports and copies the shared configuration files.

1	rnb.initialize.reports(dir.reports, dir.configuration = "configuration")

dir.reports

Directory to host report files. This must be a character of length one that specifies a non-existent path, as this methods attempts to create it.

dir.configuration

Subdirectory to host configuration files shared by the reports. This must be a character of length one that gives location as a path relative to dir.reports. Also, strong restrictions apply to the path name. See the description of the createReport function for more details. This method creates the directory and copies configuration files that define cascading style sheet (CSS) definitions and Javascript functions used by the HTML reports.

TRUE if the report directory was successfully created and the configuration files were copied to the specified location; FALSE otherwise.

Yassen Assenov

createReport for initializing an HTML report

dir.reports <- "~/infinium_studies/cancer_study/reports"
if (!rnb.initialize.reports(dir.reports)) {
    cat("ERROR: Could not initialize configuration in ", dir.reports, "\n", sep = "")
}