rnb.plot.ct.heatmap: rnb.plot.ct.heatmap

In RnBeads: RnBeads

Description

Plot contributions of the cell types

Usage

rnb.plot.ct.heatmap(ct.obj, type = "nonnegative", writeToFile = FALSE, ...)

Arguments

ct.obj	Object of class CellTypeInferenceResult as returned by rnb.execute.ct.estimation.
type	Type of cell type contributions to plot.
writeToFile	If TRUE, the plot will be written to a file.
...	Other arguments passed to createReportPlot.

Details

The cell type contributions are visualized as a heatmap

Value

if writeToFile=TRUE an object of class ReportPlot, or the protted matrix otherwise

Author(s)

Pavlo Lutsik

RnBeads documentation built on March 3, 2021, 2 a.m.