sampleCovgApply-methods: sampleCovgApply-methods

In RnBeads: RnBeads

Description

Applies a function over the coverage values for all samples in an RnBSet using a low memory footprint.

Usage

## S4 method for signature 'RnBSet'
sampleCovgApply(object, fn, type = "sites", ...)

Arguments

object	object inheriting from RnBSet
fn	function to be applied
type	character singleton. Specify "sites" (default) or a region type over which the function is applied
...	arguments passed on to the function

Value

Result analogous to apply(covg(rnbSet, type), 2, FUN=FUN)

See Also

covg Retrieving the matrix of coverage values

RnBeads documentation built on March 3, 2021, 2 a.m.