estimatep0: Estimate proportion unchanged genes
In SAGx: Statistical Analysis of the GeneChip
Description
Usage
Arguments
Value
Author(s)
References
Description
The function uses the vector of p-values to estimate p0.
Usage
1
estimatep0(ps = pp, B = 500, range = seq(0,0.95, by = 0.05))
Arguments
ps
the vector of p-values, e.g. from firstpass
B
the number of Bootstrap samples
range
the values considered
Value
the value of p0, the proportion unchanged genes
Author(s)
Per Broberg
References
Storey, J. A Direct Approach to the False Discovery Rate, Technical Report Stanford (2001)
SAGx documentation built on Nov. 8, 2020, 8:18 p.m.
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Description Usage Arguments Value Author(s) References
Description
The function uses the vector of p-values to estimate p0.
Usage
1 | estimatep0(ps = pp, B = 500, range = seq(0,0.95, by = 0.05))
|
Arguments
ps |
the vector of p-values, e.g. from firstpass |
B |
the number of Bootstrap samples |
range |
the values considered |
Value
the value of p0, the proportion unchanged genes
Author(s)
Per Broberg
References
Storey, J. A Direct Approach to the False Discovery Rate, Technical Report Stanford (2001)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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