rank.genes: Rank genes with respect to multiple criteria
In SAGx: Statistical Analysis of the GeneChip
Description
Usage
Arguments
Value
Author(s)
Description
It is assumed that genes come in rows and the criteria in columns.
Furthermore, high values should be good.
After ranking the genes with respect to each criterion, the function does a PCA on the ranks,
uses the firsta PC to obtain the final ranks. In principle it could happen that genes are ranked
in the opposite direction to the one intended, but that should be evident from a quick glance at the
results.
Usage
1
rank.genes(data = indats)
Arguments
data
A matrix with the criteria in columns.
Value
The total ranks of the genes.
Author(s)
Per Broberg
SAGx documentation built on Nov. 8, 2020, 8:18 p.m.
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Description Usage Arguments Value Author(s)
Description
It is assumed that genes come in rows and the criteria in columns. Furthermore, high values should be good. After ranking the genes with respect to each criterion, the function does a PCA on the ranks, uses the firsta PC to obtain the final ranks. In principle it could happen that genes are ranked in the opposite direction to the one intended, but that should be evident from a quick glance at the results.
Usage
1 | rank.genes(data = indats)
|
Arguments
data |
A matrix with the criteria in columns. |
Value
The total ranks of the genes.
Author(s)
Per Broberg
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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