p0.mom: Estimate proportion unchanged genes
In SAGx: Statistical Analysis of the GeneChip
Description
Usage
Arguments
Value
Author(s)
References
Description
The function uses the vector of p-values to estimate p0.
Usage
1
p0.mom(ps = pvalues)
Arguments
ps
the vector of p-values, e.g. from firstpass
Value
the value of p0, the proportion unchanged genes as a list with
components
mgf
estimate from the mgf method
PRE
estimate from the PRE method
experimental1
experimental2
Author(s)
Per Broberg
References
Broberg, P. A new estimate of the proportion unchanged genes, 2005, Genome Biology 5:p10
Broberg, P. A comparative review of estimates of the proportion unchanged genes and the false discovery rate, submitted (2004)
SAGx documentation built on Nov. 8, 2020, 8:18 p.m.
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Description Usage Arguments Value Author(s) References
Description
The function uses the vector of p-values to estimate p0.
Usage
1 | p0.mom(ps = pvalues)
|
Arguments
ps |
the vector of p-values, e.g. from firstpass |
Value
the value of p0, the proportion unchanged genes as a list with components
mgf |
estimate from the mgf method |
PRE |
estimate from the PRE method |
experimental1 |
|
experimental2 |
Author(s)
Per Broberg
References
Broberg, P. A new estimate of the proportion unchanged genes, 2005, Genome Biology 5:p10
Broberg, P. A comparative review of estimates of the proportion unchanged genes and the false discovery rate, submitted (2004)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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