get_marker_genes: Calculate marker genes

Description Usage Arguments Value Examples

View source: R/ShinyFunctions.R

Description

Find marker genes in the dataset. The get_auroc is used to calculate marker values for each gene.

Usage

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Arguments

dataset

expression matrix

labels

cell labels corresponding clusters

Value

data.frame containing the marker genes, corresponding cluster indexes and adjusted p-values

Examples

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d <- get_marker_genes(yan[1:10,], as.numeric(ann[,1]))
d

SC3 documentation built on Jan. 5, 2019, 6:42 p.m.