API for SNPRelate
Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data
| Global functions | |
|---|---|
| .CheckFile | Source code |
| .CloseConnection | Source code |
| .InitFile | Source code |
| .InitFile2 | Source code |
| .LastStr | Source code |
| .OpenConnBin | Source code |
| .OpenConnText | Source code |
| .cat | Source code |
| .newmat | Source code |
| .onAttach | Source code |
| .paramFst | Source code |
| .plural | Source code |
| .pretty | Source code |
| .pretty_size | Source code |
| .seldim | Source code |
| .snpgdsImport | Source code |
| SNPGDSFileClass | Man page |
| SNPGDSFileClass-class | Man page |
| SNPRelate | Man page |
| SNPRelate-package | Man page |
| hapmap_geno | Man page |
| plot.snpgdsEigMixClass | Man page Source code |
| plot.snpgdsPCAClass | Man page Source code |
| print.snpgdsDissClass | Source code |
| print.snpgdsEigMixClass | Source code |
| print.snpgdsEigMixSNPLoadingClass | Source code |
| print.snpgdsIBDClass | Source code |
| print.snpgdsIBSClass | Source code |
| print.snpgdsPCAClass | Source code |
| print.snpgdsPCASNPLoadingClass | Source code |
| snpgdsAdmixPlot | Man page Source code |
| snpgdsAdmixProp | Man page Source code |
| snpgdsAdmixTable | Man page Source code |
| snpgdsAlleleSwitch | Man page Source code |
| snpgdsApartSelection | Man page Source code |
| snpgdsBED2GDS | Man page Source code |
| snpgdsClose | Man page Source code |
| snpgdsCombineGeno | Man page Source code |
| snpgdsCreateGeno | Man page Source code |
| snpgdsCreateGenoSet | Man page Source code |
| snpgdsCutTree | Man page Source code |
| snpgdsDiss | Man page Source code |
| snpgdsDrawTree | Man page Source code |
| snpgdsEIGMIX | Man page Source code |
| snpgdsErrMsg | Man page Source code |
| snpgdsExampleFileName | Man page Source code |
| snpgdsFst | Man page Source code |
| snpgdsGDS2BED | Man page Source code |
| snpgdsGDS2Eigen | Man page Source code |
| snpgdsGDS2PED | Man page Source code |
| snpgdsGEN2GDS | Man page Source code |
| snpgdsGRM | Man page Source code |
| snpgdsGetGeno | Man page Source code |
| snpgdsHCluster | Man page Source code |
| snpgdsHWE | Man page Source code |
| snpgdsIBDKING | Man page Source code |
| snpgdsIBDMLE | Man page Source code |
| snpgdsIBDMLELogLik | Man page Source code |
| snpgdsIBDMoM | Man page Source code |
| snpgdsIBDSelection | Man page Source code |
| snpgdsIBS | Man page Source code |
| snpgdsIBSNum | Man page Source code |
| snpgdsIndInb | Man page Source code |
| snpgdsIndInbCoef | Man page Source code |
| snpgdsIndivBeta | Man page Source code |
| snpgdsIndivBetaRel | Man page Source code |
| snpgdsLDMat | Man page Source code |
| snpgdsLDpair | Man page Source code |
| snpgdsLDpruning | Man page Source code |
| snpgdsMergeGRM | Man page Source code |
| snpgdsOpen | Man page Source code |
| snpgdsOption | Man page Source code |
| snpgdsPCA | Man page Source code |
| snpgdsPCACorr | Man page Source code |
| snpgdsPCASNPLoading | Man page Source code |
| snpgdsPCASampLoading | Man page Source code |
| snpgdsPED2GDS | Man page Source code |
| snpgdsPairIBD | Man page Source code |
| snpgdsPairIBDMLELogLik | Man page Source code |
| snpgdsPairScore | Man page Source code |
| snpgdsSNPList | Man page Source code |
| snpgdsSNPListClass | Man page |
| snpgdsSNPListIntersect | Man page Source code |
| snpgdsSNPRateFreq | Man page Source code |
| snpgdsSampMissRate | Man page Source code |
| snpgdsSelectSNP | Man page Source code |
| snpgdsSlidingWindow | Man page Source code |
| snpgdsSummary | Man page Source code |
| snpgdsTranspose | Man page Source code |
| snpgdsVCF2GDS | Man page Source code |
| snpgdsVCF2GDS_R | Man page Source code |
