seqExampleFileName: Example files
In SeqArray: Data management of large-scale whole-genome sequence variant calls
Description
Usage
Arguments
Value
Author(s)
Examples
Description
The example files of VCF and GDS format.
Usage
1
seqExampleFileName(type=c("gds", "vcf", "KG_Phase1"))
Arguments
type
either "gds" (by default) or "vcf"
Value
Return the path of a VCF file in the package if type="vcf", or
the path of a GDS file if type="gds". If type="KG_Phase1",
return the path of GDS file on Chromosome 22 of the 1000 Genomes Phase 1
project.
Author(s)
Xiuwen Zheng
Examples
1
2
3
4
5
seqExampleFileName("gds")
seqExampleFileName("vcf")
seqExampleFileName("KG_Phase1")
SeqArray documentation built on Nov. 8, 2020, 5:08 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
The example files of VCF and GDS format.
Usage
1 | seqExampleFileName(type=c("gds", "vcf", "KG_Phase1"))
|
Arguments
type |
either "gds" (by default) or "vcf" |
Value
Return the path of a VCF file in the package if type="vcf", or
the path of a GDS file if type="gds". If type="KG_Phase1",
return the path of GDS file on Chromosome 22 of the 1000 Genomes Phase 1
project.
Author(s)
Xiuwen Zheng
Examples
1 2 3 4 5 | seqExampleFileName("gds")
seqExampleFileName("vcf")
seqExampleFileName("KG_Phase1")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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