Files in SeqArray
Big Data Management of Whole-genome Sequence Variant Calls

NEWS
DESCRIPTION
NAMESPACE
README.md
TODO
data/KG_P1_SampData.RData
R/Conversion.R R/UtilsExport.R R/AllGenerics.R R/UtilsMerge.R R/asVCF.R R/AllClasses.R R/Methods-SeqVarGDSClass.R R/Summary.R R/Utilities.R R/ConvVCF2GDS.R R/Internal.R R/Methods.R man/seqGetData.Rd man/seqVCF_Header.Rd man/seqNumAllele.Rd man/seqAsVCF.Rd man/seqStorageOption.Rd man/seqExport.Rd man/seqBED2GDS.Rd man/seqParallel.Rd man/seqGDS2SNP.Rd man/seqTranspose.Rd man/seqVCF_SampID.Rd man/seqVCF2GDS.Rd man/KG_P1_SampData.Rd man/seqSNP2GDS.Rd man/seqParallelSetup.Rd man/seqClose.Rd man/seqSummary.Rd man/SeqVarGDSClass-class.Rd man/seqSystem.Rd man/seqDelete.Rd man/seqMerge.Rd man/seqBlockApply.Rd man/seqSetFilter.Rd man/seqExampleFileName.Rd man/seqOpen.Rd man/seqAlleleFreq.Rd man/seqApply.Rd man/seqGetFilter.Rd man/seqOptimize.Rd man/seqMissing.Rd man/seqGDS2VCF.Rd man/seqDigest.Rd man/SeqArray-package.Rd man/seqSetFilterCond.Rd
vignettes/seqarray_workflow.png
vignettes/R_Integration.Rmd vignettes/SeqArrayTutorial.Rmd vignettes/OverviewSlides.Rmd
vignettes/seqarray_bib.bib
inst/CITATION
inst/doc/SeqArrayTutorial.Rmd
inst/doc/OverviewSlides.html
inst/doc/R_Integration.html
inst/doc/R_Integration.R inst/doc/OverviewSlides.Rmd
inst/doc/SeqArrayTutorial.html
inst/doc/SeqArrayTutorial.R inst/doc/R_Integration.Rmd
inst/extdata/1KG_phase1_release_v3_chr22.gds
inst/extdata/CEU_Exon.gds
inst/extdata/CEU_Exon.vcf.gz
inst/unitTests/test_cpp.R inst/unitTests/test_asVCF.R inst/unitTests/test_c.R inst/unitTests/test_utils.R inst/unitTests/test_func.R inst/unitTests/test_examples.R
inst/unitTests/data/Valid.RData
tests/test.R
build/vignette.rds
src/ReadBySample.h
src/Index.cpp
src/GetData.cpp
src/vectorization.c
src/Makevars
src/Methods.cpp
src/ReadByVariant.h
src/LinkSNPRelate.cpp
src/FileMerge.cpp
src/ConvVCF2GDS.cpp
src/vectorization.h
src/R_SeqArray.c
src/ConvGDS2VCF.cpp
src/ReadByVariant.cpp
src/ConvToGDS.cpp
src/pkg_test.cpp
src/SeqArray.cpp
src/ReadBySample.cpp
src/Index.h
SeqArray documentation built on Dec. 25, 2017, 2:01 a.m.