SeqArray: Big Data Management of Whole-genome Sequence Variant Calls
Version 1.16.0

Big data management of whole-genome sequencing variant calls with thousands of individuals: genotypic data (e.g., SNVs, indels and structural variation calls) and annotations in SeqArray files are stored in an array-oriented and compressed manner, with efficient data access using the R programming language.

Package details

AuthorXiuwen Zheng [aut, cre], Stephanie Gogarten [aut], David Levine [ctb], Cathy Laurie [ctb]
Bioconductor views DataRepresentation Genetics Infrastructure Sequencing
MaintainerXiuwen Zheng <zhengx@u.washington.edu>
LicenseGPL-3
Version1.16.0
URL http://github.com/zhengxwen/SeqArray
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("SeqArray")

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SeqArray documentation built on May 31, 2017, 11:23 a.m.