Big data management of whole-genome sequencing variant calls with thousands of individuals: genotypic data (e.g., SNVs, indels and structural variation calls) and annotations in SeqArray files are stored in an array-oriented and compressed manner, with efficient data access using the R programming language.
|Author||Xiuwen Zheng [aut, cre], Stephanie Gogarten [aut], David Levine [ctb], Cathy Laurie [ctb]|
|Bioconductor views||DataRepresentation Genetics Infrastructure Sequencing|
|Date of publication||2018-09-10|
|Maintainer||Xiuwen Zheng <[email protected]>|
|Package repository||View on Bioconductor|
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