IPPI: Multilayer analysis Cava et al. BMC Genomics 2017
In StarBioTrek: StarBioTrek
Description
Usage
Arguments
Value
Examples
Description
IPPI function takes as input pathway and network data in order to select genes with central role in that pathway. Please see Cava et al. 2017 BMC Genomics
Usage
1
IPPI(pathax, netwa)
Arguments
pathax
pathway matrix Please see example path for format
netwa
a dataframe Please see example path for format netw
Value
a list with driver genes for each pathway
Examples
1
2
3
## Not run:
DRIVER_SP<-IPPI(pathax=pathway_matrix[,1:3],netwa=netw_IPPI[1:50000,])
## End(Not run)
StarBioTrek documentation built on Nov. 8, 2020, 8:02 p.m.
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Description Usage Arguments Value Examples
Description
IPPI function takes as input pathway and network data in order to select genes with central role in that pathway. Please see Cava et al. 2017 BMC Genomics
Usage
1 | IPPI(pathax, netwa)
|
Arguments
pathax |
pathway matrix Please see example path for format |
netwa |
a dataframe Please see example path for format netw |
Value
a list with driver genes for each pathway
Examples
1 2 3 | ## Not run:
DRIVER_SP<-IPPI(pathax=pathway_matrix[,1:3],netwa=netw_IPPI[1:50000,])
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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