listpathnet: Get human KEGG pathway data and the output of list_path_net...
In StarBioTrek: StarBioTrek

listpathnet creates a list of interacting genes for each human pathway.

1	listpathnet(lista_net, pathway_exp)

`lista_net`	output of path_net
`pathway_exp`	pathway data as provided by getKEGGdata

a list of genes for each pathway (interacting genes belong to that pathway)

1 2	lista_network<-pathnet(genes.by.pathway=pathway[1:5],data=netw) list_path<-listpathnet(lista_net=lista_network,pathway=pathway[1:5])

StarBioTrek documentation built on Nov. 8, 2020, 8:02 p.m.

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README.md Working with StarBioTrek package

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