StructuralVariantAnnotation: Variant annotations for structural variants

StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects.

Package details

AuthorDaniel Cameron [aut, cre] (<>), Ruining Dong [aut] (<>)
Bioconductor views Annotation DataImport Genetics Sequencing VariantAnnotation
MaintainerDaniel Cameron <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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StructuralVariantAnnotation documentation built on Nov. 8, 2020, 5:43 p.m.