StructuralVariantAnnotation: Variant annotations for structural variants

StructuralVariantAnnotation contains useful helper functions for dealing with structural variants in VCF format. The packages contains functions for parsing VCFs from a number of popular callers as well as functions for dealing with breakpoints involving two separate genomic loci encoded as GRanges objects.

Package details

AuthorDaniel Cameron [aut, cre] (<https://orcid.org/0000-0002-0951-7116>), Ruining Dong [aut] (<https://orcid.org/0000-0003-1433-0484>)
Bioconductor views Annotation DataImport Genetics Sequencing VariantAnnotation
MaintainerDaniel Cameron <[email protected]>
LicenseGPL-3
Version1.0.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("StructuralVariantAnnotation")

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StructuralVariantAnnotation documentation built on May 6, 2019, 4:58 a.m.