checkQuality: Checking for the integration quality of two libraries

In SwathXtend: SWATH extended library generation and statistical data analysis

Description

Checking for the integration quality of two libraries

Usage

checkQuality(datBaseLib, datExtLib, ...)

Arguments

datBaseLib	a data frame of the base library
datExtLib	a data frame of the add-on library
...	Additional parameters to pass in

Value

A list of quality indicators, including squared retention time (RT) correlation coefficient, root mean squared errors of RT residuals, and median of relative ion intensity correlation coefficient

Examples

libfiles <- paste(system.file("files",package="SwathXtend"),
   c("Lib2.txt","Lib3.txt"),sep="/")
datBaseLib <- readLibFile(libfiles[1])
datExtLib <- readLibFile(libfiles[2])
res <- checkQuality(datBaseLib, datExtLib)

SwathXtend documentation built on Nov. 8, 2020, 6:42 p.m.