object and converts it into a boulder IO record for Primer3. Essentially it converts it into a
list of character vectors that each contain the tag and the value in the form: "TAG=VALUE". More
on this format can be found in the Primer3 manual.
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TsIO of TsIOList object for which a Primer3 boulder IO record should be created.
Optional path (character) to the
This function is usually not needed by the user, because functions such as
designPrimers handle IO record generation. However, this function can for
instance be useful to generate IO records, write them to a file and pass them to Primer3 in the
A character vector containing the lines of the IO record.
TsIO: Create IO record from
TsIOList: Create IO record from
http://primer3.org/manual.html for Primer3 manual.
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# chromosome 11 truncated transcript sequences data("chr11_truncated_txs_seq") # create TsIOList object for primer desing from sequence templates obj <- TAPseqInput(chr11_truncated_txs_seq, product_size_range = c(350, 500)) # create boulder IO record boulder_io <- createIORecord(obj) head(boulder_io, 11)
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