TPP: Analyze thermal proteome profiling (TPP) experiments
Version 3.4.0

Analyze thermal proteome profiling (TPP) experiments with varying temperatures (TR) or compound concentrations (CCR).

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AuthorDorothee Childs, Nils Kurzawa, Holger Franken, Carola Doce, Mikhail Savitski and Wolfgang Huber
Bioconductor views MassSpectrometry Proteomics
Date of publicationNone
MaintainerDorothee Childs <dorothee.childs@embl.de>
LicenseArtistic-2.0
Version3.4.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("TPP")

Man pages

analyze2DTPP: Analyze 2D-TPP experiment
analyzeTPPCCR: Analyze TPP-CCR experiment
analyzeTPPTR: Analyze TPP-TR experiment
hdacCCR_config: The configuration table to analyze hdacCCR_data.
hdacCCR_data: TPP-CCR example dataset (replicates 1 and 2)
hdacCCR_smallExample: Example subsets of a Panobinostat TPP-CCR dataset (replicates...
hdacTR_config: The configuration table to analyze hdacTR_data.
hdacTR_data: TPP-TR example dataset.
hdacTR_resultsTable_smallExample: Example of a TPP-TR result table.
hdacTR_smallExample: Example subset of a Panobinostat TPP-TR dataset and the...
panobinostat_2DTPP_config: The configuration table to analyze panobinostat_2DTPP_data.
panobinostat_2DTPP_data: 2D-TPP-CCR example dataset
panobinostat_2DTPP_smallExample: Example subsets of a Panobinostat 2D-TPP dataset and the...
resultTable: Example of a TPP-TR result table.
TPP: Thermal proteome profiling (TPP)
tpp2dAddAdditionalInfo: Add additional info to 2D-TPP CCR output data
tpp2dCalcFractAbundance: Calculate fractional abundance and DMSO ratio of successive...
tpp2dComputeFoldChanges: Compute 2D-TPP fold changes
tpp2dCreateDRplots: Create dose response curve plots for 2D-TPP data
tpp2dCreateReport: Create Report of 2D-TPP analysis
tpp2dCreateTPPTRreference: Create TPP-TR reference for 2D-TPP experiment
tpp2dCurveFit: Run TPP-CCR analysis for 2D-TPP experiment
tpp2dExport: Produce Excel table of 2D-TPP experiment.
tpp2dExportPlots: Export plots for 2D-TPP experiment.
tpp2dImport: Import 2D-TPP data
tpp2dMerge2dRef: Merge 2D-TPP result data with TPP-TR reference data
tpp2dNormalize: Median normalization of protein fold changes of 2D-TPP data
tpp2dPlotQChist: Plot quality control histograms
tpp2dPlotQCpEC50: Plot quality control pEC50 plots
tpp2dSplineFitAndTest: Fit splines and perform f-Test
tpp2dSplinePlot: Fit splines and generate ggplot visualizations
tpp2dTRReferenceObject: TPP-TR reference object
tppccrCurveFit: Fit dose response curves
tppccrImport: Import TPP-CCR dataset for analysis by the 'TPP' package.
tppccrNormalize: Normalize data from TPP-CCR experiments
tppccrNormalizeToReference: Normalize fold changes of TPP-CCR experiment to a reference...
tppccrPlotCurves: Plot dose response curves
tppccrResultTable: Summarize results of a TPP-CCR study
tppccrTransform: Transform fold changes of TPP-CCR experiment
tppDefaultTheme: Default ggplot theme for melting curve plots.
TPP-deprecated: Deprecated functions in package 'TPP'
tppExport: Produce Excel table of TPP-TR or TPP-CCR experiment.
tppQCPlotsCorrelateExperiments: Visually compare fold changes of different TPP experiments.
tppRefData: Example of a reference dataset for 2D-TPP experiments.
tpptrAnalyzeMeltingCurves: Analyze fitted curve parameters to detect significant shifts...
tpptrCurveFit: Fit melting curves to all proteins in a dataset.
tpptrDefaultNormReqs: Default filter criteria for fold change normalization
tpptrFitSplines: Perform spline fitting
tpptrFTest: Analyze spline fits to detect differential behavior over time
tpptrImport: Import TPP-TR datasets for analysis by the 'TPP' package.
tpptrNormalize: Normalize protein fold changes
tpptrPlotSplines: Plot spline fits per protein
TPPTR_reference_results_HepG2: Example of a reference dataset for 2D-TPP experiments.
tpptrSplineFitAndTest: Perform spline fitting and analyze by moderated F-test
tpptrTidyUpESets: Tidy up expressionSets

Functions

.onLoad Man page
TPP Man page
TPP-deprecated Man page Man page Man page Man page Man page Man page Man page
TPP-package Man page
TPPTR_reference_results_HepG2 Man page
addTableToPlot Source code
analyze2DTPP Man page Source code
analyzeTPPCCR Man page Source code
analyzeTPPTR Man page Source code
applyCoeffs Source code
assignBins Source code
assignCompNumber_to_expName Source code
checkAndReturnDataSetting Source code
checkCPUs Source code
checkFunctionArgs Source code
checkIfLegendPossible Source code
checkResultCols_tppccr Source code
checkResultCols_tpptr Source code
check_if_data_is_eSet_list Source code
computeMPdiffs Source code
computeMinimalSlopes Source code
computeNormFactors Source code
computePvalues Source code
compute_spline_auc Source code
configTableListToLong Source code
convert_2D_cfgTable_to_CCR_cfgTable Source code
convert_2dData_wide_to_long Source code
convert_trData_wide_to_long Source code
createComparisonTable Source code
createValidPlotPaths Source code
create_spline_plots Source code
curveFitFctCCR_pEC50qualCheckCol Source code
detectLabelColumnsInConfigTable Source code
drCurveParamNames Source code
eSetsToLongTable_fData Source code
eSetsToLongTable_fc Source code
eval_spline_model Source code
exportFct_addPlotColumns Source code
exportFct_addPlotLinks_1DTPP Source code
exportFct_addPlotLinks_2DTPP Source code
exportFct_colorCodeColumns Source code
exportFct_convertBoolean_1DTPP Source code
exportFct_convertBoolean_2DTPP Source code
exportFct_ensureUniqueColumns Source code
exportFct_sortCols Source code
exportFct_trySave Source code
exprSubset Source code
extractConc Source code
extract_fit_factors Source code
fctSigmoidCCR Source code
fctSigmoidTR Source code
filterFCs Source code
filterOther Source code
filterTables Source code
findJointP Source code
fitDRCurve Source code
fitMeltCurves Source code
fitSigmoidCCR Source code
fitSigmoidTR Source code
fit_and_eval_spline_model Source code
fit_spline_model Source code
fit_splines_under_H0_and_H1 Source code
generateColors4Temps Source code
guessDRparamBoundaries Source code
guessInitialDRslope Source code
guessInitialpEC50 Source code
hdacCCR_config Man page
hdacCCR_data Man page
hdacCCR_smallExample Man page
hdacTR_config Man page
hdacTR_data Man page
hdacTR_resultsTable_smallExample Man page
hdacTR_smallExample Man page
helperFctPlotAll Source code
helperFctPlotGood Source code
helperFctPlotSingle Source code
import2DTR_main Source code
importAdditionalCols Source code
importCheckConfigTable Source code
importCheckExperimentNames Source code
importCheckTemperatures Source code
importFct_CheckDataFormat Source code
importFct_checkComparisons Source code
importFct_checkConditions Source code
importFct_checkExperimentCol Source code
importFct_createCCRInputFrom2DData Source code
importFct_create_fData Source code
importFct_create_pData Source code
importFct_df_to_eSet Source code
importFct_extractFCs Source code
importFct_fcCols Source code
importFct_makeOutputDirs Source code
importFct_makeUniqueIDs Source code
importFct_readConfigTable Source code
importFct_readFiles Source code
importFct_removeDuplicates Source code
importFct_reportValidValues Source code
importFct_rmZeroSias Source code
importTR_main Source code
importTR_tidy Source code
importTidyFoldChanges Source code
inferApparentStabilities Source code
inflectionPoint Source code
invoke_spline_prediction Source code
meltCurveParamNames Source code
meltingCurveSlope Source code
meltingPoint Source code
mergeOutputTables_CCR Source code
mergeOutputTables_TR Source code
merge_cols Source code
modelSelector Source code
mpSinglePval Source code
nonLabelColumns Source code
obtain_fcStr_from_df_annotation Source code
onLoad Source code
pValFctFilterModels Source code
pValFctPerformComparisons Source code
pValFctPerformSingleComparison Source code
pValFct_addMPdiff_and_MinSlope_Columns Source code
pValsCurrentBin Source code
panobinostat_2DTPP_config Man page
panobinostat_2DTPP_data Man page
panobinostat_2DTPP_smallExample Man page
paramsSigmoid Source code
plotColors Source code
plotColors_splineFits Source code
plotDRCurve Source code
plotIndividual Source code
plotLineTypes Source code
plotMeltingCurve Source code
plotNormCurves Source code
plot_2D_data_on_temperature_range Source code
plot_fSta_distribution Source code
plot_pVal_distribution Source code
predict_and_plot_spline_models Source code
predict_spline Source code
prepareForImport Source code
qcPlotFctVennTable Source code
qcPlotFct_Bottleplot Source code
qcPlotFct_CreateVenn Source code
qcPlotFct_MeltPointHist Source code
qcPlotFct_VennWrapper Source code
qcPlotFct_invokeBottleplots Source code
rSquared Source code
removeInvalidPaths Source code
replaceZeros Source code
resultTable Man page
retrieveDataFromESets_CCR Source code
retrieveDataFromESets_TR Source code
robustNlsPredict Source code
splitIDsIntoSeparateRows Source code
splitTidyMeasurementsForExport Source code
stopImplicitCluster Source code
storeDRCurveParams Source code
storeMeltCurveParams Source code
summarizeResultTable Source code
tidyUpReferenceObject Source code
tpp2dAddAdditionalInfo Man page Source code
tpp2dCalcFractAbundance Man page Source code
tpp2dComputeFoldChanges Man page Source code
tpp2dCreateCCRConfigFile Man page Source code
tpp2dCreateDRplots Man page Source code
tpp2dCreateReport Man page Source code
tpp2dCreateTPPTRreference Man page Source code
tpp2dCurveFit Man page Source code
tpp2dEvalConfigTable Man page Source code
tpp2dExport Man page Source code
tpp2dExportPlots Man page Source code
tpp2dImport Man page Source code
tpp2dMerge2dRef Man page Source code
tpp2dNormalize Man page Source code
tpp2dPlotCCRAllCurves Man page Source code
tpp2dPlotCCRGoodCurves Man page Source code
tpp2dPlotCCRSingleCurves Man page Source code
tpp2dPlotQChist Man page Source code
tpp2dPlotQCpEC50 Man page Source code
tpp2dRemoveZeroSias Man page Source code
tpp2dReplaceColNames Man page Source code
tpp2dSplineFitAndTest Man page Source code
tpp2dSplinePlot Man page Source code
tpp2dTRReferenceObject Man page Source code
tppDefaultTheme Man page Source code
tppExport Man page Source code
tppQCPlotsCorrelateExperiments Man page Source code
tppRefData Man page
tppccrCurveFit Man page Source code
tppccrImport Man page Source code
tppccrNormalize Man page Source code
tppccrNormalizeToReference Man page Source code
tppccrPlotCurves Man page Source code
tppccrResultTable Man page Source code
tppccrTransform Man page Source code
tpptrAnalyzeMeltingCurves Man page Source code
tpptrCurveFit Man page Source code
tpptrDefaultNormReqs Man page Source code
tpptrFTest Man page Source code
tpptrFitSplines Man page Source code
tpptrHelperFitandPlot Source code
tpptrImport Man page Source code
tpptrNormalize Man page Source code
tpptrPlotSplines Man page Source code
tpptrQCplots Source code
tpptrSplineAUCs Source code
tpptrSplineFitAndTest Man page Source code
tpptrTidyUpESets Man page Source code
writeTRRefOutputTable Source code

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/TPP.R
R/TPPTR_reference_results_HepG2.R
R/addTableToPlot.R
R/analyze2DTPP.R
R/analyzeTPPCCR.R
R/analyzeTPPTR.R
R/applyCoeffs.R
R/assignCompNumber_to_expName.R
R/checkAndReturnDataSetting.R
R/checkCPUs.R
R/checkFunctionArgs.R
R/checkIfLegendPossible.R
R/checkResultCols_tppccr.R
R/checkResultCols_tpptr.R
R/check_if_data_is_eSet_list.R
R/computeMPdiffs.R
R/computeMinimalSlopes.R
R/computeNormFactors.R
R/computePvalues.R
R/compute_spline_auc.R
R/convert_2D_cfgTable_to_CCR_cfgTable.R
R/convert_2dData_wide_to_long.R
R/convert_trData_wide_to_long.R
R/createComparisonTable.R
R/createValidPlotPaths.R
R/create_spline_plots.R
R/curveFitFctCCR_pEC50qualCheckCol.R
R/detectLabelColumnsInConfigTable.R
R/drCurveParamNames.R
R/eSetsToLongTable_fData.R
R/eSetsToLongTable_fc.R
R/eval_spline_model.R
R/exportFct_addPlotColumns.R
R/exportFct_addPlotLinks_1DTPP.R
R/exportFct_addPlotLinks_2DTPP.R
R/exportFct_colorCodeColumns.R
R/exportFct_convertBoolean_1DTPP.R
R/exportFct_convertBoolean_2DTPP.R
R/exportFct_ensureUniqueColumns.R
R/exportFct_sortCols.R
R/exportFct_trySave.R
R/exprSubset.R
R/extractConc.R
R/extract_fit_factors.R
R/fctSigmoidCCR.R
R/fctSigmoidTR.R
R/filterFCs.R
R/filterOther.R
R/filterTables.R
R/findJointP.R
R/fitDRCurve.R
R/fitMeltCurves.R
R/fitSigmoidCCR.R
R/fitSigmoidTR.R
R/fit_and_eval_spline_model.R
R/fit_spline_model.R
R/fit_splines_under_H0_and_H1.R
R/generateColors4Temps.R
R/guessDRparamBoundaries.R
R/guessInitialDRslope.R
R/guessInitialpEC50.R
R/hdacCCR_smallExample.R
R/hdacTR_resultsTable_smallExample.R
R/hdacTR_smallExample.R
R/helperFctPlotAll.R
R/helperFctPlotGood.R
R/helperFctPlotSingle.R
R/import2DTR_main.R
R/importCheckConfigTable.R
R/importCheckExperimentNames.R
R/importCheckTemperatures.R
R/importFct_CheckDataFormat.R
R/importFct_checkComparisons.R
R/importFct_checkCondtitions.R
R/importFct_checkExperimentCol.R
R/importFct_createCCRInputFrom2DData.R
R/importFct_create_fData.R
R/importFct_create_pData.R
R/importFct_df_to_eSet.R
R/importFct_extractFCs.R
R/importFct_fcCols.R
R/importFct_makeOutputDirs.R
R/importFct_makeUniqueIDs.R
R/importFct_readConfigTable.R
R/importFct_readFiles.R
R/importFct_removeDuplicates.R
R/importFct_rmZeroSias.R
R/importTR_main.R
R/importTR_tidy.R
R/inferApparentStabilities.R
R/inflectionPoint.R
R/invoke_spline_prediction.R
R/meltCurveParamNames.R
R/meltingCurveSlope.R
R/meltingPoint.R
R/mergeOutputTables_CCR.R
R/mergeOutputTables_TR.R
R/merge_cols.R
R/modelSelector.R
R/mpSinglePval.R
R/obtain_fcStr_from_df_annotation.R
R/pValFctFilterModels.R
R/pValFctPerformComparisons.R
R/pValFctPerformSingleComparison.R
R/pValFct_addMPdiff_and_MinSlope_Columns.R
R/pValsCurrentBin.R
R/panobinostat_2DTPP_smallExample.R
R/paramsSigmoid.R
R/plotColors.R
R/plotColors_splineFits.R
R/plotDRCurve.R
R/plotIndividual.R
R/plotLineTypes.R
R/plotMeltingCurve.R
R/plotNormCurves.R
R/plot_2D_data_on_temperature_range.R
R/plot_fSta_distribution.R
R/plot_pVal_distribution.R
R/predict_and_plot_spline_models.R
R/predict_spline.R
R/qcPlotFctVennTable.R
R/qcPlotFct_Bottleplot.R
R/qcPlotFct_MeltPointHist.R
R/qcPlotFct_VennWrapper.R
R/qcPlotFct_createVenn.R
R/qcPlotFct_invokeBottleplots.R
R/rSquared.R
R/removeInvalidPaths.R
R/retrieveDataFromESets_CCR.R
R/retrieveDataFromESets_TR.R
R/robustNlsPredict.R
R/splitIDsIntoSeparateRows.R
R/splitTidyMeasurementsForExport.R
R/stopImplicitCluster.R
R/storeDRCurveParams.R
R/storeMeltCurveParams.R
R/summarizeResultTable.R
R/tidyUpReferenceObject.R
R/tpp2dAddAdditionalInfo.R
R/tpp2dCalcFractAbundance.R
R/tpp2dComputeFoldChanges.R
R/tpp2dCreateDRplots.R
R/tpp2dCreateReport.R
R/tpp2dCreateTPPTRreference.R
R/tpp2dCurveFit.R
R/tpp2dExport.R
R/tpp2dExportPlots.R
R/tpp2dImport.R
R/tpp2dMerge2dRef.R
R/tpp2dNormalize.R
R/tpp2dPlotQChist.R
R/tpp2dPlotQCpEC50.R
R/tpp2dSplineFitAndTest.R
R/tpp2dSplinePlot.R
R/tpp2dTRReferenceObject.R
R/tppDefaultTheme.R
R/tppDeprecated.R
R/tppExport.R
R/tppQCPlotsCorrelateExperiments.R
R/tppccrCurveFit.R
R/tppccrImport.R
R/tppccrNormalize.R
R/tppccrNormalizeToReference.R
R/tppccrPlotCurves.R
R/tppccrResultTable.R
R/tppccrTransform.R
R/tpptrAnalyzeMeltingCurves.R
R/tpptrCurveFit.R
R/tpptrDefaultNormReqs.R
R/tpptrFTest.R
R/tpptrFitSplines.R
R/tpptrImport.R
R/tpptrNormalize.R
R/tpptrPlotSplines.R
R/tpptrQCplots.R
R/tpptrSplineAUCs.R
R/tpptrSplineFitAndTest.R
R/tpptrTidyUpESets.R
R/writeTRRefOutputTable.R
build
build/vignette.rds
data
data/TPPTR_reference_results_HepG2.RData
data/datalist
data/hdacCCR_smallExample.RData
data/hdacTR_resultsTable_smallExample.RData
data/hdacTR_smallExample.RData
data/panobinostat_2DTPP_smallExample.RData
inst
inst/doc
inst/doc/NPARC_analysis_of_TPP_TR_data.R
inst/doc/NPARC_analysis_of_TPP_TR_data.Rnw
inst/doc/NPARC_analysis_of_TPP_TR_data.pdf
inst/doc/TPP_introduction_1D.R
inst/doc/TPP_introduction_1D.Rnw
inst/doc/TPP_introduction_1D.pdf
inst/doc/TPP_introduction_2D.R
inst/doc/TPP_introduction_2D.Rnw
inst/doc/TPP_introduction_2D.pdf
inst/example_data
inst/example_data/2D_example_data
inst/example_data/2D_example_data/PFC_39093_PF1_QV1_P0101918C.txt
inst/example_data/2D_example_data/PFC_39099_PF1_QV1_P0101908C.txt
inst/example_data/2D_example_data/PFC_39101_PF1_QV1_P0101898C.txt
inst/example_data/2D_example_data/PFC_39106_PF1_QV1_P0101868C.txt
inst/example_data/2D_example_data/PFC_39108_PF1_QV1_P0101878C.txt
inst/example_data/2D_example_data/PFC_39110_PF1_QV1_P0101888C.txt
inst/example_data/2D_example_data/Panobinostat_TPP-2D_config.xlsx
inst/example_data/2D_example_data/fractAbundInData.RData
inst/example_data/2D_example_data/referenceNormData.RData
inst/example_data/2D_example_data/shortCCRresults.RData
inst/example_data/2D_example_data/shortData2d.RData
inst/example_data/CCR_example_data
inst/example_data/CCR_example_data/Panobinostat_TPP-CCR_config.xlsx
inst/example_data/CCR_example_data/panobinostat_1_merged_results_20150227_1017_proteins.txt
inst/example_data/CCR_example_data/panobinostat_2_merged_results_20150227_1110_proteins.txt
inst/example_data/TR_example_data
inst/example_data/TR_example_data/Panobinostat_TPP-TR_config.xlsx
inst/example_data/TR_example_data/panobinostat_1_merged_results_20150226_1013_proteins.txt
inst/example_data/TR_example_data/panobinostat_2_merged_results_20150226_1139_proteins.txt
inst/example_data/TR_example_data/vehicle_1_merged_results_20150227_0908_proteins.txt
inst/example_data/TR_example_data/vehicle_2_merged_results_20150227_0847_proteins.txt
inst/extdata
inst/extdata/randomESet.Rdata
inst/extdata/validationData_meltCurveFilter.Rdata
inst/extdata/validationData_pvalBinning.Rdata
inst/extdata/validationData_pvalComputation.Rdata
inst/test_data
inst/test_data/Panobinostat_2DTPP_smallExample.R
inst/test_data/panobinostat_2DTPP_smallExample.RData
inst/test_data/panobinostat_2D_fcResults.rds
inst/test_data/panobinostat_2D_fcResults2.rds
inst/test_data/panobinostat_2D_fitResults.rds
inst/test_data/panobinostat_2D_fitResults2.rds
inst/test_data/panobinostat_2D_fitResults3.rds
inst/test_data/panobinostat_2D_importResults.rds
inst/test_data/panobinostat_2D_importResults2.rds
inst/test_data/panobinostat_2D_normResults.rds
inst/test_data/panobinostat_2D_normResults2.rds
inst/test_data/panobinostat_2D_normResults3.rds
inst/test_data/panobinostat_CCR_fitResults.rds
inst/test_data/panobinostat_ex_confg.txt
inst/test_data/panobinostat_ex_confg2.txt
inst/tpp2d_report.Rmd
man
man/TPP-deprecated.Rd
man/TPP.Rd
man/TPPTR_reference_results_HepG2.Rd
man/analyze2DTPP.Rd
man/analyzeTPPCCR.Rd
man/analyzeTPPTR.Rd
man/hdacCCR_config.Rd
man/hdacCCR_data.Rd
man/hdacCCR_smallExample.Rd
man/hdacTR_config.Rd
man/hdacTR_data.Rd
man/hdacTR_resultsTable_smallExample.Rd
man/hdacTR_smallExample.Rd
man/panobinostat_2DTPP_config.Rd
man/panobinostat_2DTPP_data.Rd
man/panobinostat_2DTPP_smallExample.Rd
man/resultTable.Rd
man/tpp2dAddAdditionalInfo.Rd
man/tpp2dCalcFractAbundance.Rd
man/tpp2dComputeFoldChanges.Rd
man/tpp2dCreateDRplots.Rd
man/tpp2dCreateReport.Rd
man/tpp2dCreateTPPTRreference.Rd
man/tpp2dCurveFit.Rd
man/tpp2dExport.Rd
man/tpp2dExportPlots.Rd
man/tpp2dImport.Rd
man/tpp2dMerge2dRef.Rd
man/tpp2dNormalize.Rd
man/tpp2dPlotQChist.Rd
man/tpp2dPlotQCpEC50.Rd
man/tpp2dSplineFitAndTest.Rd
man/tpp2dSplinePlot.Rd
man/tpp2dTRReferenceObject.Rd
man/tppDefaultTheme.Rd
man/tppExport.Rd
man/tppQCPlotsCorrelateExperiments.Rd
man/tppRefData.Rd
man/tppccrCurveFit.Rd
man/tppccrImport.Rd
man/tppccrNormalize.Rd
man/tppccrNormalizeToReference.Rd
man/tppccrPlotCurves.Rd
man/tppccrResultTable.Rd
man/tppccrTransform.Rd
man/tpptrAnalyzeMeltingCurves.Rd
man/tpptrCurveFit.Rd
man/tpptrDefaultNormReqs.Rd
man/tpptrFTest.Rd
man/tpptrFitSplines.Rd
man/tpptrImport.Rd
man/tpptrNormalize.Rd
man/tpptrPlotSplines.Rd
man/tpptrSplineFitAndTest.Rd
man/tpptrTidyUpESets.Rd
tests
tests/testthat
tests/testthat.R
tests/testthat/test_applyCoeffs.R
vignettes
vignettes/NPARC_analysis_of_TPP_TR_data.Rnw
vignettes/TPP_introduction_1D.Rnw
vignettes/TPP_introduction_2D.Rnw
vignettes/TPP_references.bib
TPP documentation built on May 20, 2017, 9:35 p.m.