tpp2dTRReferenceObject: TPP-TR reference object

In TPP: Analyze thermal proteome profiling (TPP) experiments

Description

Definition of a TPP-TR reference object

Usage

tpp2dTRReferenceObject(
  tppRefData = NULL,
  tppRefPath = NULL,
  fcStr = "norm_rel_fc_",
  qualColName = "qupm"
)

Arguments

tppRefData	TPP-TR reference object that can be directly passed to the function
tppRefPath	character string containing a system path to a RData file containing an TPP-TR reference object
fcStr	character string indicating which columns contain the fold changes
qualColName	character string indicating which column contain protein identification quality measures

Value

A TPP-TR reference object

Examples

trRef <- system.file("example_data/2D_example_data/referenceNormData.RData", package="TPP")
tpp2dTRReferenceObject(tppRefPath=trRef)

TPP documentation built on Nov. 8, 2020, 5:55 p.m.