API for TPP2D
Detection of ligand-protein interactions from 2D thermal profiles (DLPTP)

Global functions
.TPP_checkFunctionArgs Source code
.TPP_detectLabelColumnsInConfigTable Source code
.TPP_importCheckTemperatures Source code
.TPP_importFct_checkComparisons Source code
.TPP_importFct_checkConditions Source code
.TPP_importFct_checkExperimentCol Source code
.TPP_importFct_readConfigTable Source code
.TPP_importFct_removeDuplicates Source code
.TPP_importFct_rmZeroSias Source code
.TPP_nonLabelColumns Source code
.TPP_replaceZeros Source code
.checkDfColumns Source code
.checkRatioRef Source code
.detectOutliers Source code
.evalH1Model Source code
.evalH1SlopeEC50Model Source code
.fitH0ParamDf Source code
.fitH1ParamDf Source code
.getFitDf Source code
.getOptLimits Source code
.getStartParameters Source code
.medianNormalizeRatios Source code
.min_RSS_h0 Source code
.min_RSS_h0_gradient Source code
.min_RSS_h0_gradient_trim Source code
.min_RSS_h0_trim Source code
.min_RSS_h1 Source code
.min_RSS_h1_gradient Source code
.min_RSS_h1_gradient_trim Source code
.min_RSS_h1_slope50_gradient Source code
.min_RSS_h1_slope_pEC50 Source code
.min_RSS_h1_trim Source code
.paste_rmNA Source code
.removeAmbiguousMeasurements Source code
.shrinkFstat Source code
.trim_sum Source code
TPP2D-deprecated Man page
TPP_importCheckConfigTable Man page Source code
annotateDataList Man page Source code
bootstrapNull Man page Source code
bootstrapNullAlternativeModel Man page Source code
competeModels Man page
computeFStatFromParams Man page
computeFdr Man page Source code
computeFdr-deprecated Man page
computeFstat Man page
configWide2Long Man page Source code
config_tab Man page
filterOutContaminants Man page Source code
findHits Man page Source code
fitAndEvalDataset Man page
fitH0Model Man page Source code
fitH1Model Man page
getFDR Man page Source code
getModelParamsDf Man page Source code
getPEC504Temperature Man page
getPvalues Man page Source code
gg_qq Man page Source code
import2dDataset Man page Source code
import2dMain Man page Source code
plot2dTppFit Man page Source code
plot2dTppProfile Man page Source code
plot2dTppRelProfile Man page Source code
raw_dat_list Man page
recomputeSignalFromRatios Man page Source code
renameColumns Man page Source code
resolveAmbiguousProteinNames Man page Source code
runTPP2D Man page Source code
simulated_cell_extract_df Man page
tpcaResult Man page
tpp2dExperiment-class Man page
TPP2D documentation built on June 22, 2020, 2 a.m.