Files in Uniquorn
Identification of cancer cell lines based on their weighted mutational/ variational fingerprint

DESCRIPTION
README.md
NAMESPACE
inst/Libraries_Ref_gen_GRCH37_Uniquorn_DB.RData
inst/CITATION
inst/NEWS.Rd
inst/doc/Uniquorn.R inst/doc/Uniquorn.Rmd
inst/doc/Uniquorn.html
inst/Libraries/GRCH37/CELLMINER/W1_Uniquorn_DB.RData
inst/Libraries/GRCH37/CELLMINER/W0.5_Uniquorn_DB.RData
inst/Libraries/GRCH37/CELLMINER/CCL_List_Uniquorn_DB.RData
inst/Libraries/GRCH37/CELLMINER/W0.excluded_variants_Uniquorn_DB.RData
inst/Libraries/GRCH37/CELLMINER/W0_Uniquorn_DB.RData
inst/Libraries/GRCH37/CELLMINER/W0.25_Uniquorn_DB.RData
inst/extdata/HT29.ident.tsv.gz
inst/extdata/HT29_TEST.vcf
inst/extdata/HT29.vcf.gz
vignettes/Uniquorn.Rmd R/Utility.R R/Show_database_information.R R/remove_custom_vcf_from_uniquorn.R R/Init_and_load_identification.R R/Parser_scripts.R R/Match_query_ccl_with_database.R R/Add_custom_vcfs.R R/Identify_VCF_file.R R/Parse_COSMIC_CCLE_CCLs.R R/Statistics_identification.R R/add_missing_cls.R R/Create_BED_files.R man/remove_library_from_database.Rd man/add_p_q_values_statistics.Rd man/init_and_load_identification.Rd man/create_bed_file.Rd man/identify_vcf_file.Rd man/add_penality_statistics.Rd man/show_which_ccls_contain_variant.Rd man/add_missing_cls.Rd man/remove_ccls_from_database.Rd man/initiate_canonical_databases.Rd man/parse_vcf_query_into_db.Rd man/show_contained_variants_for_ccl.Rd man/parse_ccle_genotype_data.Rd man/parse_vcf_file.Rd man/parse_cosmic_genotype_data.Rd man/read_library_names.Rd man/read_mutation_grange_objects.Rd man/show_contained_ccls.Rd man/add_custom_vcf_to_database.Rd man/match_query_ccl_to_database.Rd man/show_contained_variants_in_library.Rd
build/vignette.rds
tests/testthat.R tests/testthat/test_a_Show_database_information.R tests/testthat/test_c_remove_add.R tests/testthat/test_b_identification.R
Uniquorn documentation built on May 2, 2018, 4:20 a.m.