read_mutation_grange_objects: read_mutation_grange_objects
In Uniquorn: Identification of cancer cell lines based on their weighted mutational/ variational fingerprint
Description
Usage
Arguments
Value
Description
Read the GRange object for a specific library
Usage
1
2
read_mutation_grange_objects(library_name,
mutational_weight_inclusion_threshold, ref_gen, test_mode)
Arguments
library_name
a character string giving the name of the library
mutational_weight_inclusion_threshold
a numerical giving the
lower bound for mutational weight to be included
ref_gen
Reference genome version. All training sets are
associated with a reference genome version. Default: GRCH37
test_mode
Is this a test? Just for internal use
Value
The R Table sim_list which contains the CoSMIC CLP fingerprints
Uniquorn documentation built on Nov. 8, 2020, 8:07 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Read the GRange object for a specific library
Usage
1 2 | read_mutation_grange_objects(library_name,
mutational_weight_inclusion_threshold, ref_gen, test_mode)
|
Arguments
library_name |
a character string giving the name of the library |
mutational_weight_inclusion_threshold |
a numerical giving the lower bound for mutational weight to be included |
ref_gen |
Reference genome version. All training sets are associated with a reference genome version. Default: GRCH37 |
test_mode |
Is this a test? Just for internal use |
Value
The R Table sim_list which contains the CoSMIC CLP fingerprints
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.