Description Usage Arguments Value
View source: R/Match_query_ccl_with_database.R
Matches query ccl to the database
1 2 | match_query_ccl_to_database(g_query, ref_gen = "GRCH37", library_name,
mutational_weight_inclusion_threshold)
|
g_query |
IRanges object that contains the variants |
ref_gen |
Reference genome version. All training sets are associated with a reference genome version. Default: GRCH37 |
library_name |
a character string giving the name of the library |
mutational_weight_inclusion_threshold |
a numerical giving the lower bound for mutational weight to be included |
The R Table sim_list which contains the CoSMIC CLP fingerprints
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