MutCat_indel_df: Example mutational catalog for the Indel vignette
In YAPSA: Yet Another Package for Signature Analysis
Description
Usage
Value
References
Examples
Description
MutCat_indel_df: A data frame in the format of a mutation catalog.
The mutational catalog contains Indel variants from the
GenomeOfNl_raw data. Variants were random sampled for 15 artificial
patient for the purpose to have a Indel mutational catalog and have to
show the functionality of the package. The results of the mutational
catalog should not be interpreted fot they biological relevance.
Mutational catalog was created with
create_indel_mutation_catalogue_from_df function.
Usage
1
data(GenomeOfNl_MutCat)
Value
A data fame in the layout of a Indel mutational catalog
References
Mutational catalog created form release version 5 of the Genome
of NL
http://www.nlgenome.nl/?page_id=9
Examples
1
2
3
data(GenomeOfNl_MutCat)
head(MutCat_indel_df)
dim(MutCat_indel_df)
YAPSA documentation built on Nov. 8, 2020, 4:59 p.m.
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Description Usage Value References Examples
Description
MutCat_indel_df: A data frame in the format of a mutation catalog.
The mutational catalog contains Indel variants from the
GenomeOfNl_raw data. Variants were random sampled for 15 artificial
patient for the purpose to have a Indel mutational catalog and have to
show the functionality of the package. The results of the mutational
catalog should not be interpreted fot they biological relevance.
Mutational catalog was created with
create_indel_mutation_catalogue_from_df function.
Usage
1 | data(GenomeOfNl_MutCat)
|
Value
A data fame in the layout of a Indel mutational catalog
References
Mutational catalog created form release version 5 of the Genome of NL http://www.nlgenome.nl/?page_id=9
Examples
1 2 3 | data(GenomeOfNl_MutCat)
head(MutCat_indel_df)
dim(MutCat_indel_df)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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