aafCytoband-class: Class aafCytoband, a class for cytoband data

In annaffy: Annotation tools for Affymetrix biological metadata

Description

An abstraction for cytoband data from Bioconductor data packages.

Objects from the Class

Objects are generally created by the aafCytoband constructor. Objects can also be created manually by calls of the form new("aafCytoband", band, genbank).

Slots

band:

Object of class character containing genomic cytoband

gene:

Object of class character containing containing Gene ID

Methods

getText

(aafCytoband): Returns text of band.

getURL

(aafCytoband): Returns a URL corresponding entry in NCBI's cytoband map viewer.

See generic implementations of getHTML, getTD, and getCSS.

Author(s)

Colin A. Smith, [e-mail]

See Also

aafCytoband

annaffy documentation built on Nov. 8, 2020, 8:02 p.m.