aafIntensity-class: Class aafIntensity, a class for gene expression values
In annaffy: Annotation tools for Affymetrix biological metadata

Description Objects from the Class Slots Extends Methods Author(s) See Also

A class for displaying gene expression values with a green background of differing intensities.

Objects are generally created by the aafTableInt constructor. Objects can also be created manually by calls of the form new("aafIntensity", intensity).

.Data:: Object of class numeric

Class numeric, from data part.

getTD: (aafIntensity): Returns an HTML table cell with background varrying from white to green depending on intensity. Scaling is controlled by two options, minIntensity (fully white) and maxIntensity (fully green), usually set by writeHTML.

See generic implementations of getText, getURL, getHTML, and getCSS.

Colin A. Smith, annaffy@colinsmith.org

aafTableInt

annaffy documentation built on Nov. 8, 2020, 8:02 p.m.