getVariantAnnotation: getVariantAnnotation
In cellbaseR: Querying annotation data from the high performance Cellbase web
Description
Usage
Arguments
Value
Examples
Description
A convienice method to fetch variant annotation for specific variant/s
Usage
1
getVariantAnnotation(object, id, param = NULL)
Arguments
object
an object of class CellBaseR
id
a charcter vector of length < 200 of genomic variants,
eg 19:45411941:T:C
param
an object of class CellBaseParam
Value
a dataframe of the query result
Examples
1
2
cb <- CellBaseR()
res <- getVariantAnnotation(cb, "19:45411941:T:C")
cellbaseR documentation built on Nov. 8, 2020, 5:38 p.m.
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Description Usage Arguments Value Examples
Description
A convienice method to fetch variant annotation for specific variant/s
Usage
1 | getVariantAnnotation(object, id, param = NULL)
|
Arguments
object |
an object of class CellBaseR |
id |
a charcter vector of length < 200 of genomic variants, eg 19:45411941:T:C |
param |
an object of class CellBaseParam |
Value
a dataframe of the query result
Examples
1 2 | cb <- CellBaseR()
res <- getVariantAnnotation(cb, "19:45411941:T:C")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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