Description Usage Arguments Value See Also Examples
Read GCTX row or column ids
1 2 3 | read.gctx.ids(...)
read_gctx_ids(gctx_path, dim = "row")
|
... |
arguments passed on to |
gctx_path |
path to the GCTX file |
dim |
which ids to read (row or column) |
a character vector of row or column ids from the provided file
Other GCTX parsing functions:
GCT
,
append.dim()
,
fix.datatypes()
,
parse.gctx()
,
process_ids()
,
read.gctx.meta()
,
write.gctx.meta()
,
write.gctx()
,
write.gct()
1 2 3 4 5 6 7 | gct_file <- system.file("extdata", "modzs_n25x50.gctx", package="cmapR")
# row ids
rid <- read_gctx_ids(gct_file)
head(rid)
# column ids
cid <- read_gctx_ids(gct_file, dim="column")
head(cid)
|
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