inst/examples/reorientAndMergeLGs.R

In contiBAIT: Improves Early Build Genome Assemblies using Strand-Seq Data

data(exampleLGList)
data(exampleWCMatrix)

reorientedMatrix <- reorientAndMergeLGs(exampleLGList,
										  exampleWCMatrix)

# Note that in this example data, everything is correctly oreiented to
# to begin with, so all contigs come out as + orientation