addFeatures: addFeatures

In cummeRbund: Analysis, exploration, manipulation, and visualization of Cufflinks high-throughput sequencing data.

Description

Adds a data.frame of features to a the SQLite backend database.

Usage

## S4 method for signature 'CuffSet'
addFeatures(object, features, level="genes", ...)

Arguments

object	An object of class ('CuffSet' or 'CuffData')
features	A data.frame of features to add. 1st column MUST contain ids (ie. gene_id for 'gene' features, isoform_id for 'isoform' features, etc)
level	One of c('genes','isoforms','TSS','CDS') to indicate which type of featurs you are being added, and to what data-level.
...	Additional arguments.

Details

None

Value

None

Note

None

Author(s)

Loyal A. Goff

References

None

Examples

	#None yet.

cummeRbund documentation built on Nov. 8, 2020, 7:53 p.m.